NGS-based proteomics services

Experience the discovery power of the Illumina Protein Prep proteomics solution through a trusted service provider

Benefits of NGS-based proteomics services

Next-generation sequencing (NGS)-based proteomics services offer a practical alternative to building in-house capabilities, giving you immediate access to sequencing and analytical expertise without having to invest in the required infrastructure. Outsourcing NGS-based protein sequencing services can help you reduce costs, accelerate timelines, and scale studies efficiently while ensuring high-quality, reproducible results. Combining high–plex proteomics assays with the power and scalability of NGS enables simultaneous interrogation of thousands of proteins in a single sample, maximizing the discovery power of proteomic studies. In addition, NGS-based proteomics services offer scalable multiplexing with the flexibility to increase content to support large-scale applications.

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Illumina Protein Prep service overview

Illumina Protein Prep proteomics services utilize Illumina Protein Prep, a high-throughput NGS assay that can detect and quantify over 9500 unique human proteins from a single sample across more than 200 biological pathways. Illumina Protein Prep is the largest NGS-based proteomic panel on the market, with 4000 more protein targets than the leading antibody-based assay.1 Illumina Protein Prep uses slow off-rate modified aptamer (SOMAmer) Reagents, validated through methods like mass spectrometry and enzyme-linked immunosorbent assay (ELISA), to ensure reliable and reproducible results at the speed and scale of NGS.

Illumina Protein Prep service highlights

Outsourcing your Illumina Protein Prep proteomics project to a trusted service provider offers a practical alternative to building in-house workflows, giving you immediate access to NGS-based proteomics capabilities and expertise. Illumina Protein Prep services can help you accelerate discoveries and gain broader biological insights with consistent, quality-controlled data. These services also simplify data analysis so you can focus on interpretation along with the option to integrate multiomics for a deeper understanding of biology.

Illumina Protein Prep service providers can accommodate a wide range of project sizes, from small pilot studies to large-scale research initiatives. In addition to delivering high-quality data, these labs also provide detailed quality control metrics and support for both basic and advanced proteomics analysis services, ensuring that researchers receive reliable data from their samples. Additional benefits of Illumina Protein Prep services include:

Easy, economical onboarding

Eliminate the need for upfront equipment costs, analysis capabilities, and ongoing maintenance.

Fast results and access to expertise

Accelerate studies with efficient comprehensive workflows with trained Illumina Protein Prep service providers, enabling rapid turnaround times.

Low research and operational risk

Take advantage of a low-risk entry point with an option for pilot studies, pre-validated protocols, and built-in quality control standards when outsourcing Illumina Protein Prep services.

How to outsource to a

proteomics service provider

Two scientists, one male and one female, engaging in conversation while the female scientist points to some results on a clipboard; the back of another female scientist, tubes, and other lab equipment blurry in the foreground.

Connect with a specialist

Use the contact form to speak with an Illumina representative specialized in proteomics services. Once connected, the Illumina specialist will get you in touch with a service provider to best suit your proteomics needs.

Illumina Protein Prep service providers

View our growing network of trusted Illumina Protein Prep proteomics service providers.

Service provider Location Contact info
SeqCenter Pennsylvania, United States https://www.seqcenter.com/contact/
TGEN Arizona, United States soma@tgen.org
University of California, Los Angeles - Technology Center for Genomics Bioinformatics California, United States sequencing@mednet.ucla.edu
University of Colorado Anschutz Medical Campus Colorado, United States genomics.core@cuanschutz.edu
Washington University - McDonnell Genome Institute Missouri, United States gtac-mgi-list@email.wustl.edu
Genome Quebec Quebec, Canada infoservices@genomequebec.com

Service provider Location Contact info
Genomics Taiwan Taiwan https://www.genomics.com.tw/en/contact
The University of Sydney - Sydney Mass Spectrometry Arizona, United States mass.spectrometry@sydney.edu.au

Service provider Location Contact info
IAB Czechia iabio@iabio.eu
TATAA Sweden info@tataa.com
LIGAN France gtac-mgi-list@email.wustl.edu
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Process overview

The following is a typical process when working with your Illumina Protein Prep service provider.

1. Consultation After reaching out to an Illumina specialist, you’ll be connected to a trusted service provider through the Illumina network. During this phase, you'll discuss your research goals, sample types, desired outcomes, and any specific requirements such as target protein panels or data analysis needs.
2. Sample submission and intake Providers will guide you through sample preparation requirements and shipping protocols. Upon receipt, samples are logged, assessed for quality, and prepared for processing.
3. Library preparation Using Illumina Protein Prep kits, the service providers convert protein samples into sequencing-ready libraries.
4. Sequencing Libraries are sequenced using the Illumina NovaSeq X Series or NovaSeq 6000 sequencing systems, enabling detection of up to ~9500 unique human proteins. Sequencing parameters are optimized based on project scope.
5. Data analysis and QC Service providers deliver comprehensive QC metrics and offer basic or advanced data analysis. This may include protein quantification and bioinformatics interpretation tailored to your research questions.
6. Delivery of results Final data sets are securely delivered along with documentation and optional consultation to help interpret findings. Providers may also support integration with other omics data if needed.

FAQ

Yes, Illumina Protein Prep providers offer project consultations. Fill out the form at the end of this page to learn how to initiate a consultation with these providers.

Yes, these service providers deliver QC metrics for all samples. Fill out the form at the end of this page to learn more about Illumina Protein Prep services.

Many providers offer basic data analysis; some also provide advanced analysis or bioinformatics support. Fill out the form at the end of this page to learn more about these service providers. 

Yes, some providers accept pilot projects to validate performance before scaling. Availability varies by provider. Fill out the form at the end of this page to learn more about these providers and potential pilot project discounts.

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Interested in offering Illumina Protein Prep services?

Join the network as an Illumina Protein Prep service provider

Getting started as an Illumina Protein Prep service provider means joining a trusted group where you will partner with the leader in sequencing technology. As a provider, you gain more than just access to Illumina workflows—you join a global network that offers visibility, credibility, and growth opportunities.

Male scientist is pipetting into a well plate on a lab bench; the Illumina Protein Prep box kit next to him and Tecan workstation in the background

References

  1. Olink. Olink Explore HT. https://olink.com/products/olink-explore-ht. Accessed January 28, 2025.